PRISMOID allows users to download the SQL file of the database, calculated DSSP feature files, calculated NACCESS feature files, and PTM sites data.
Our entry web page organizes in a comprehensive manner detailed PTM annotation on the 3D structure and biological information.
The entries can be searched through three different methods, including ID search, Keyword search, and Advanced search.
PRISMOID is a freely available web-based resource providing 3D structure information of protein post-translational modification sites. PRISMOID retrieves comprehensive PTM information from six major protein sequence-based PTM databases. The collected protein sequences with PTM sites were then mapped to protein 3D structures. PRISMOID not only includes PTM sites data but also integrates and annotates the disease mutation affecting the PTM sites. Other information, such as protein secondary structure properties, solvent accessibility area features, protein disorder region, and protein domain context, etc., were also collected and annotated in PRISMOID.
Publications and tools used or contributing to the development of PRISMOID.